by Biostatsquid | Jul 9, 2023 | scRNAseq, Tutorials
R TUTORIAL: Perform pathway enrichment analysis with clusterProfiler() in R Table of contents 5 Before you start 5 Step-by-step clusterProfiler tutorial 9 Step 0: Set up your script and load the data 9 Step 1: Prepare inputs for clusterProfiler 9 Step 2: Run...
by Biostatsquid | Jul 9, 2023 | scRNAseq, Tutorials
R TUTORIAL: Visualization of pathway enrichment analysis results with clusterProfiler Table of contents 5 Before you start 5 Step-by-step tutorial 9 Creating an enrichResult object 9 Barplots 9 Dotplots 9 Cnetplot 9 Heatplot 9 Treeplot 9 Enrichment map 9 Upsetplot 5...
by Biostatsquid | Jan 10, 2023 | scRNAseq, Tutorials
R TUTORIAL: Pre-process your scRNAseq data with this easy, step-by-step pipeline Table of contents 5 Before you start 5 scRNAseq pre-processing pipeline: complete script 5 Step-by-step guide to analyse your data with Seurat 9 Step 1: Set up your script 9 Step 2:...
